Soft Computing for Biological Systems by Hemant J. Purohit Vipin Chandra Kalia & Ravi Prabhakar More
Author:Hemant J. Purohit, Vipin Chandra Kalia & Ravi Prabhakar More
Language: eng
Format: epub
Publisher: Springer Singapore, Singapore
Name
Methodology
Dataset
Performance (%)
Reference
Transporter family prediction
Nearest neighbor
TS-3899
72.3%
2008
TransportTP (http://bioinfo3.noble.org/transporter)
HMM and SVM
–
81.8%
2009
Functional residue prediction
Evolutionary features
–
–
2009
Transporters, their class, family prediction (http://rbf.bioinfo.tw $ sachen/tcrbf.html)
PSSM and biochemical properties
TS-693
Transporter, 76%
Class, 73%
Family, 69%
2010
Transporter family prediction (http://rbf.bioinfo.tw/~sachen/ttrbf.html)
PSSM and biochemical properties
TS-651
ET, 90.1%
Protein/mRNA, 80.1%
Ion transporters, 70.3%
Others, 82.3%
2011
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